#import "@preview/diatypst:0.7.0": *
#import "@preview/grayness:0.4.1": *
#import "importer/main.typ": *


// Patch the ETH logo to actually be white:
#let logo = "assets/uzh-logo.svg"
#let original = read(logo)
#let changed = original.replace(
  "#FFFFFF",
  black.to-hex(),
)

#let logos = (
  image("assets/eth-logo.svg"),
  image(bytes(changed))
)





#let ratio = 16/9
#let layout_size = "large"
#let authors = ("Rémy Moll",)
#let date = "18. September 2024"
#let title = "Simulating the EOR with self-consistent growth of galaxies"
#let subtitle = "Master's thesis presentation"
#let title-color = color.blue.darken(50%);
#let bg-color = color.white;



///// Front page /////
#let notebook = json("../workdir/11_visualization/very_high_res_snapshot.ipynb")
#let front_image = image_cell(notebook, cell_id: "very_high_res_slice")
#let (height, space) = layouts.at(layout_size)
#let width = ratio * height

#set page(
  height: height,
  width: width,
  footer: none,
  header: none,
  margin: 0cm
)

#let space = 2cm
#place[
  #set image(
    width: 105%,
  )
  #front_image,
]
#place[
  #box(
    width: 100%,
    height: 100%,
    fill: color.black.transparentize(65%)
  )
]

#block(
  inset: (x:0.5*space, y:1em),
  width: 100%,
  height: 60%,
  align(bottom)[#text(2.0em, weight: "bold", fill: bg-color, title)],
  above: 0cm,
  below: 0cm,
)


#let padded_logos = logos.map(logo => box(height: 1.5em, inset: (x:0.3cm), logo))


#block(
  height: 40%,
  width: 100%,
  fill: bg-color,
  inset: (x:0.5*space,top:1cm, bottom: 1em),
  above: 0cm,
  below: 0cm,
  if subtitle != none {[
    #text(1.4em, fill: title-color, weight: "bold", subtitle)
  ]} +
  if subtitle != none and date != none { text(1.4em)[ \ ] } +
  if date != none {text(1.1em, date)} +
  align(
    bottom,
    stack(
      dir: ltr,
        authors.join(", ", last: " & "),
        h(1fr),
        ..padded_logos,
    )
  )
)
// #block(
//   height: 20%,
//   width: 100%,
//   fill: none,
//   inset: (x:0.5*space,top:1cm, bottom: 1em),
//   above: 0cm,
//   below: 0cm,
//   stack(
//     dir: ltr,
//       authors.join(", ", last: " & "),
//       h(1fr),
//       ..padded_logos,
//   )

// )


///// Main content /////

#show: slides.with(
  title: title,
  subtitle: subtitle,
  date: date,
  authors: authors,
  toc: false,
  layout: layout_size,
  ratio: ratio,
  title-color: title-color,
  bg-color: bg-color,
)



#show footnote.entry: set text(size: 0.6em)
#set footnote.entry(gap: 3pt)
#set align(horizon)


= Simulating the EOR
// REFERENCES NEEDED!

== The 21cm signal
#lorem(20)
- a
- b
- c

== The halo model of reionization
#lorem(20)
- a
- b
- c

== The current state of simulations
#lorem(20)



= Halo mass history

== Effect on the flux profiles
#lorem(50)

== Inferring from #smallcaps[Thesan] data
#lorem(50)


= Implementation
== Simplified usage

```python
import beorn

parameters = beorn.load_parameters("params.yaml")
```
// TODO use a code cell instead!


// title describing the results - signal, maps, power spectra => noticeable improvements
= Results
== Maps
#lorem(50)

== Signal
#lorem(50)

== Summary statistics
#lorem(50)

#set heading(numbering: none, outlined: false)
= Thank you for your attention


#set page(numbering: none)
// Backup slides

== Validation - old implementation
TODO

== Validation - resolution effects
TODO





== Backup slides
This is a backup slide
#lorem(50)

== Another backup slide
#lorem(50)